The detailed information of tRNA gene sequence


Sequence ID>SRA1002116
Genome IDSRR001308.253443
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 235
End posion on genome 162
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agcaacagtt
tRNA gene sequence 
GGTCAGGTAGCTCAGTTGGTAGAGCAATGGACTGAAAATCCATGTGTCGGGGGTTCAACT
CCCTCCCTGACCACtt
Downstream region at tRNA end position 
cgatggcaac
Secondary structure (Cloverleaf model)
>SRA1002116	Phe	GAA
                   t      ACtt cgatggcaac
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C
                     G - C          T C
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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