The detailed information of tRNA gene sequence


Sequence ID>SRA1002119
Genome IDSRR001308.254475
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 105
End posion on genome 31
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
cgaaacgagt
tRNA gene sequence 
GGGCGTGTAGCTCAGTGGTAGAGCACTGTGTTGACATCGCAGGGGTCGCAAGTTCAATCC
TTGCCACGCCCACCA
Downstream region at tRNA end position 
tttcctgccc
Secondary structure (Cloverleaf model)
>SRA1002119	Val	GAC
                   t      ACCA tttcctgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     C G T T C     A
        G A        A      | | | | |     A
      T     C T C G       G C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK