The detailed information of tRNA gene sequence


Sequence ID>SRA1002120
Genome IDSRR001308.256409
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 170
End posion on genome 96
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcgccgacgc
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAGAGAGGGGTTCGACTC
CCCTAGGGACTGCCA
Downstream region at tRNA end position 
ggcgtggcgc
Secondary structure (Cloverleaf model)
>SRA1002120	Glu	TTC
                   c      GCCA ggcgtggcgc
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AGAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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