The detailed information of tRNA gene sequence


Sequence ID>SRA1002130
Genome IDSRR001308.261666
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 212
End posion on genome 137
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgaggacagt
tRNA gene sequence 
ACGCCAGTAGCTCAACTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCGTGCCA
Downstream region at tRNA end position 
accagtccag
Secondary structure (Cloverleaf model)
>SRA1002130	Trp	CCA
                   t      GCCA accagtccag
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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