The detailed information of tRNA gene sequence


Sequence ID>SRA1002131
Genome IDSRR001308.263269
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 207
End posion on genome 131
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tttcaacctt
tRNA gene sequence 
GAATCCTTAGCTCAGTTGGTTAGAGCGTTACGTTGACATCGTAAAGGTCACTGGTTCGAG
TCCAGTAGGGTTCACAA
Downstream region at tRNA end position 
catccacgtt
Secondary structure (Cloverleaf model)
>SRA1002131	Val	GAC
                   t      ACAA catccacgtt
                     G - C
                     A - T
                     A - T
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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