The detailed information of tRNA gene sequence


Sequence ID>SRA1002132
Genome IDSRR001308.263748
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 223
End posion on genome 150
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
ataacgctac
tRNA gene sequence 
GCCTCTGTAGCTCAGTTGGTAGAGCAGCTGACTCTTAATCAGCGGGTCCACGGTTCGAGC
CCGTGCGGAGGCACtg
Downstream region at tRNA end position 
aagtaaaagc
Secondary structure (Cloverleaf model)
>SRA1002132	Lys	CTT
                   c      ACtg aagtaaaagc
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          C G
                    T     G T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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