The detailed information of tRNA gene sequence


Sequence ID>SRA1002133
Genome IDSRR001308.264604
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 183
End posion on genome 257
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position
cacgaaggac
tRNA gene sequence
GGGCGCGTAGCTCAGCGGTAGAGCACTACGTTGACATCGTAGTGGTCACAGGTTCGATCC
CTGTCGCGCCCACCA
Downstream region at tRNA end position
ttaaccgcca
Secondary structure (Cloverleaf model)
>SRA1002133	Val	GAC
                   c      ACCA ttaaccgcca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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