The detailed information of tRNA gene sequence


Sequence ID>SRA1002135
Genome IDSRR001308.266522
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 111
End posion on genome 39
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ccgcattaaa
tRNA gene sequence 
GGCCTCGTAGTACAATGGATAGTATAAGAGTTTCCGAAGCTCCAGATCCAGGTTCGATTC
CTGGCGAGGCCACtc
Downstream region at tRNA end position 
cgattcgcat
Secondary structure (Cloverleaf model)
>SRA1002135	Arg	CCG
                   a      ACtc cgattcgcat
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G G T C C     A
      T A A        A      | | | | |     G
    G       C A T G       C C A G G     C
    G       | | | +                 T T
    A       G T A T
      T A          A     AGAT
                    A   C
                    G - C
                    A - T
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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