The detailed information of tRNA gene sequence


Sequence ID>SRA1002138
Genome IDSRR001308.268749
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 158
End posion on genome 83
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcgactcaag
tRNA gene sequence 
GGGGGCATAGCTCAGCTGGGAGAGCACCGGCTTTGCAAGCCGGGGGTCGTCGGTTCGATC
CCGACTGCCTCCACCA
Downstream region at tRNA end position 
agaaatcaga
Secondary structure (Cloverleaf model)
>SRA1002138	Ala	TGC
                   g      ACCA agaaatcaga
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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