The detailed information of tRNA gene sequence


Sequence ID>SRA1002139
Genome IDSRR001308.269262
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 129
End posion on genome 53
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggccgtcaca
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTCGGTTCGGGATCGAGGAGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
caatcccgat
Secondary structure (Cloverleaf model)
>SRA1002139	Pro	CGG
                   a      ACCA caatcccgat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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