The detailed information of tRNA gene sequence


Sequence ID>SRA1002146
Genome IDSRR001308.272987
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 165
End posion on genome 90
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
cctcgtttct
tRNA gene sequence
GGGCTGGTAGCTCAGTCGGTAGAGCTGCGGACTTTTAATCCGTAGGTCCCGGGTTCGAGT
CCCGGCCGGCCCACCA
Downstream region at tRNA end position
acttctctcg
Secondary structure (Cloverleaf model)
>SRA1002146	Lys	TTT
                   t      ACCA acttctctcg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     G G C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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