The detailed information of tRNA gene sequence


Sequence ID>SRA1002149
Genome IDSRR001308.274007
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 110
End posion on genome 34
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ctcccaaatg
tRNA gene sequence 
GTAGGTATAGCTCAGTTGGTTAGAGCATCAGATTGTGGTTCTGAGGGTCGTGGGTTCGAA
TCCCATTACTTACCCTA
Downstream region at tRNA end position 
aaagtctttg
Secondary structure (Cloverleaf model)
>SRA1002149	His	GTG
                   g      CCTA aaagtctttg
                     G - C
                     T - A
                     A - T
                     G + T
                     G - C
                     T - A
                     A - T          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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