The detailed information of tRNA gene sequence


Sequence ID>SRA1002151
Genome IDSRR001308.274102
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 162
End posion on genome 235
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaatcaaagt
tRNA gene sequence 
GCGGGAATAGTTCAATGGTAGAACATCAGTTTTCCAAACTGATTACGAGGGTTCGATTCC
CTCTTTCCGCTCCA
Downstream region at tRNA end position 
tttgaatagc
Secondary structure (Cloverleaf model)
>SRA1002151	Gly	TCC
                   t      TCCA tttgaatagc
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T          T T
                    T     C T C C C     A
        A A        A      | | | | |     G
      T     C T T G       G A G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     TTAC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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