The detailed information of tRNA gene sequence


Sequence ID>SRA1002152
Genome IDSRR001308.274146
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 122
End posion on genome 32
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcttgccgc
tRNA gene sequence 
GGAGAGATGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGGGGGTTAACAGCCC
CCCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ccattctgaa
Secondary structure (Cloverleaf model)
>SRA1002152	Ser	GGA
                   c      GCCA ccattctgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGGGGGTTAACAGCCCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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