The detailed information of tRNA gene sequence


Sequence ID>SRA1002154
Genome IDSRR001308.275121
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 246
End posion on genome 172
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
agctcgattc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTACCTTGACATGGTAGGGGTCACAGGTTCGAACC
CTGTACCGCCCACCA
Downstream region at tRNA end position 
ctctcacgag
Secondary structure (Cloverleaf model)
>SRA1002154	Val	GAC
                   c      ACCA ctctcacgag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     T G T C C     A
        G A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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