The detailed information of tRNA gene sequence


Sequence ID>SRA1002155
Genome IDSRR001308.275186
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 111
End posion on genome 187
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tttacttcga
tRNA gene sequence 
GCACCCGTAGCTCAGCTGGATAGAGTATCTGACTTCGAATCAGAGGGTCGCATGTTCGAA
TCATGCCGGGTNTACCA
Downstream region at tRNA end position 
catttaattc
Secondary structure (Cloverleaf model)
>SRA1002155	Arg	TCG
                   a      ACCA catttaattc
                     G + T
                     C   N
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T A C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A T G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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