The detailed information of tRNA gene sequence


Sequence ID>SRA1002156
Genome IDSRR001308.275593
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 42
End posion on genome 117
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
agagaagaat
tRNA gene sequence
GCCGGTGTAGCTCAGCTGGTAGAGCACGTCATTCGTAATGATGGGGTCGGGGGTTCGAGT
CCCTTCACCGGCACCA
Downstream region at tRNA end position
ttcttctctc
Secondary structure (Cloverleaf model)
>SRA1002156	Thr	CGT
                   t      ACCA ttcttctctc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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