The detailed information of tRNA gene sequence


Sequence ID>SRA1002159
Genome IDSRR001308.276635
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 202
End posion on genome 278
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaccgactt
tRNA gene sequence 
GGGTCTGTAGCTCAGTTGGTTAGAGCACTGTGTTGATAACGCAGGGGTCGTTGGTTCGAG
ACCAACCAGACCCACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002159	Ile	GAT
                   t      ACCA aannnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          A G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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