The detailed information of tRNA gene sequence


Sequence ID>SRA1002162
Genome IDSRR001308.277883
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ggtcctgtgt
tRNA gene sequence 
AGGGGAGTCGCCAAGTTGGTCAAGGCATCGGATTTTGATTCCGACATGCGAGGGTTCGAG
TCCTTCCTCCCCTGCCA
Downstream region at tRNA end position 
aacctcattc
Secondary structure (Cloverleaf model)
>SRA1002162	Gln	TTG
                   t      GCCA aacctcattc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      T G A        C      | | + | |     G
    T       A C C G       G A G G G     C
    G         | | |                 T T
    G       A G G C
      T C A        A     CATGC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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