The detailed information of tRNA gene sequence


Sequence ID>SRA1002163
Genome IDSRR001308.278592
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 164
End posion on genome 90
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cataaacgct
tRNA gene sequence 
GGCGCTGTAGTTCAACGGATAGAATAGACGTTTCCTAAACGTTAGATGCGGGTTCGATTC
CCGCCGGGGCCACAA
Downstream region at tRNA end position 
aacgcccgat
Secondary structure (Cloverleaf model)
>SRA1002163	Arg	CCT
                   t      ACAA aacgcccgat
                     G - C
                     G - C
                     C - G
                     G   G
                     C - G
                     T + G
                     G - C          T T
                    T     C G C C C     A
      C A A        A      | | | | |     G
    G       C T T G       G C G G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    G + T
                    A - T
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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