The detailed information of tRNA gene sequence


Sequence ID>SRA1002166
Genome IDSRR001308.281300
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 191
End posion on genome 116
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttaaatttA
tRNA gene sequence 
TTTCCTTTCGTCTAATCCGGTTAGGACGTTACATTTTCACTGTAAAAACAGGGGTTCAAA
TCCCCTAAGGAGCTAaa
Downstream region at tRNA end position 
cttttgggca
Secondary structure (Cloverleaf model)
>SRA1002166	Glu	TTC
                   A      TAaa cttttgggca
                     T   C
                     T + G
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     T C C C C     A
    C T A A        C      | | | | |     A
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AAAC
                    T - A
                    T - A
                    A - T
                    C - G
                    A - T
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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