The detailed information of tRNA gene sequence


Sequence ID>SRA1002167
Genome IDSRR001308.281479
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 148
End posion on genome 74
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaatatag
tRNA gene sequence 
TGCGGGATAGAGCAGGGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGATGTTCGAATC
ATCCTCCCGCTACCA
Downstream region at tRNA end position 
aagaaaaccc
Secondary structure (Cloverleaf model)
>SRA1002167	Met	CAT
                   g      ACCA aagaaaaccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C T A C     A
        G A        A      | | | | |     G
      G     C G A G       G G A T G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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