The detailed information of tRNA gene sequence


Sequence ID>SRA1002169
Genome IDSRR001308.282555
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 159
End posion on genome 234
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
atttccccgt
tRNA gene sequence 
GCCGATTTAGCTCAGTTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTCAGTTCGATT
CCGACAATCGGCACCA
Downstream region at tRNA end position 
tatcgatgcg
Secondary structure (Cloverleaf model)
>SRA1002169	Thr	TGT
                   t      ACCA tatcgatgcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A          T T
                    T     C A G C C     A
      T G A        A      | | |   |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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