The detailed information of tRNA gene sequence


Sequence ID>SRA1002173
Genome IDSRR001308.286704
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 167
End posion on genome 242
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
cgcgtccctc
tRNA gene sequence 
GCCGGAATAGCTCAGTTGGTAGAGCGGCGCATTCGTAATGCGTAGGTCGCAGGTTCGACT
CCTGTTTCCGGCACCA
Downstream region at tRNA end position 
gtcgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002173	Thr	CGT
                   c      ACCA gtcgnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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