The detailed information of tRNA gene sequence


Sequence ID>SRA1002180
Genome IDSRR001308.290298
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 205
End posion on genome 130
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttaaagtt
tRNA gene sequence 
CGGGATGTAGCGTAGCCCGGTTATCGCGCCTGGTTTGGGACCAGGAGGTCGCAAGTTCGA
ATCTTGCCATCCCGACag
Downstream region at tRNA end position 
atacaaacct
Secondary structure (Cloverleaf model)
>SRA1002180	Pro	TGG
                   t      ACag atacaaacct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G T T C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A A G     C
  G           | | |                 T T
  G         T C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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