The detailed information of tRNA gene sequence


Sequence ID>SRA1002183
Genome IDSRR001308.291526
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 208
End posion on genome 134
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agaggggaac
tRNA gene sequence 
GGGGTGGTAGTTAAGTCGGTTATAACGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCCCCGCtc
Downstream region at tRNA end position 
aaaagtaaaa
Secondary structure (Cloverleaf model)
>SRA1002183	Asp	GTC
                   c      GCtc aaaagtaaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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