The detailed information of tRNA gene sequence


Sequence ID>SRA1002185
Genome IDSRR001308.293916
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 96
End posion on genome 22
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgaaccggtc
tRNA gene sequence 
GGGCGATTGGCTCAGCGGTAGAGCACCTCGTTCACATCGAGGGGGTCACTGGTTCAAATC
CAGTATCGCCCACCA
Downstream region at tRNA end position 
tttgaattgg
Secondary structure (Cloverleaf model)
>SRA1002185	Val	CAC
                   c      ACCA tttgaattgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
        G A        G      | | | | |     A
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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