The detailed information of tRNA gene sequence


Sequence ID>SRA1002188
Genome IDSRR001308.294589
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 170
End posion on genome 244
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agatgcgtga
tRNA gene sequence 
TCCGCGGTAGCTCAGTGGTAGAGCAGCCGACTGTTAATCGGCTGGTCGTAGGTTCGAATC
CTACCCGCGGAGCCA
Downstream region at tRNA end position 
tcttccagag
Secondary structure (Cloverleaf model)
>SRA1002188	Asn	GTT
                   a      GCCA tcttccagag
                     T - A
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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