The detailed information of tRNA gene sequence


Sequence ID>SRA1002191
Genome IDSRR001308.296695
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 155
End posion on genome 246
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcaagaccca
tRNA gene sequence 
GGAAAGGTGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTGTACGGTTTCTACCG
TACCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
gcagtacaaa
Secondary structure (Cloverleaf model)
>SRA1002191	Ser	CGA
                   a      GCCA gcagtacaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTACGGTTTCTACCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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