The detailed information of tRNA gene sequence


Sequence ID>SRA1002192
Genome IDSRR001308.297222
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 250
End posion on genome 164
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtggccctt
tRNA gene sequence 
GGAAGGGTGGCAGAGCGGCCGAATGCAGCGGTCTTGAAAACCGCCGGGTGATGAGCCCCG
TGGGTTCAAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gatctcgttg
Secondary structure (Cloverleaf model)
>SRA1002192	Ser	TGA
                   t      GCCA gatctcgttg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        A     CGGGTGATGAGCCCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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