The detailed information of tRNA gene sequence


Sequence ID>SRA1002197
Genome IDSRR001308.298475
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 298
End posion on genome 210
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaagttttt
tRNA gene sequence 
GCCTAGGTGGTGAAATTGGTAGACACAAGGGACTTAAAATCCCTCGGCGGGTGACCGCCG
TGCCGGTTCGATTCCGGCCCTAGGCACCA
Downstream region at tRNA end position 
tataaaatct
Secondary structure (Cloverleaf model)
>SRA1002197	Leu	TAA
                   t      ACCA tataaaatct
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCGGGTGACCGCCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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