The detailed information of tRNA gene sequence


Sequence ID>SRA1002206
Genome IDSRR001308.303539
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 161
End posion on genome 72
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgttaacgac
tRNA gene sequence 
GGAGGCGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGATAGCGCAAGTTAT
CCGTGAGTTCGAATCTCACCACCTCCGCCA
Downstream region at tRNA end position 
acttcccgcc
Secondary structure (Cloverleaf model)
>SRA1002206	Ser	TGA
                   c      GCCA acttcccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C   A
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGATAGCGCAAGTTATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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