The detailed information of tRNA gene sequence


Sequence ID>SRA1002208
Genome IDSRR001308.304216
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 122
End posion on genome 198
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaacaaacac
tRNA gene sequence 
AGGCGCGTAGCTCAGCTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGTTGGTTCGAG
TCCAATCGCGCCTACCA
Downstream region at tRNA end position 
acatcggggt
Secondary structure (Cloverleaf model)
>SRA1002208	Val	GAC
                   c      ACCA acatcggggt
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T A A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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