The detailed information of tRNA gene sequence


Sequence ID>SRA1002214
Genome IDSRR001308.307791
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 135
End posion on genome 209
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tctggcgttc
tRNA gene sequence 
GCTGCCGTAGCTCAGTGGTAGAGCACTCCATTGGTAATGGAGAGGTCGACAGTTCAATCC
TGTCTGGCAGCACCA
Downstream region at tRNA end position 
gccaaaccat
Secondary structure (Cloverleaf model)
>SRA1002214	Thr	GGT
                   c      ACCA gccaaaccat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     C - G
                     G + T          C T
                    T     C T G T C     A
        G A        A      | | | | |     A
      T     C T C G       G A C A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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