The detailed information of tRNA gene sequence


Sequence ID>SRA1002215
Genome IDSRR001308.307954
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 39
End posion on genome 115
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
cctgacctat
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTATTGGTTTCCGAAGCCAAGGGTCACAGGTTCGAC
TCCTGTCGGGCGCGCCA
Downstream region at tRNA end position 
cgcagtcctg
Secondary structure (Cloverleaf model)
>SRA1002215	Arg	CCG
                   t      GCCA cgcagtcctg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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