The detailed information of tRNA gene sequence


Sequence ID>SRA1002221
Genome IDSRR001308.311354
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 85
End posion on genome 12
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctgcgctcga
tRNA gene sequence 
GGCCCGATGGCGGAGTGGTGACGCAGAGGACTGCAAATCCTTGCACGCCGGTTCGATTCC
GGCTCGGGCCTCCA
Downstream region at tRNA end position 
aaatcctgtc
Secondary structure (Cloverleaf model)
>SRA1002221	Cys	GCA
                   a      TCCA aaatcctgtc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C G G C C     A
        G A        G      | | | | |     G
      T     G G C G       G C C G G     C
      G       | | |                 T T
      G     A C G C
        T G        A     GCAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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