The detailed information of tRNA gene sequence


Sequence ID>SRA1002229
Genome IDSRR001308.318181
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 41
End posion on genome 113
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ccaaaatttt
tRNA gene sequence 
GGTTCCGTAGTTCAATGGATAGAATAGAAGTTTCCTAAACTTTTGATGCAGGTTCGATTC
CTGTCGGGACTACac
Downstream region at tRNA end position 
aatgggcaaa
Secondary structure (Cloverleaf model)
>SRA1002229	Arg	CCT
                   t      ACac aatgggcaaa
                     G + T
                     G - C
                     T - A
                     T + G
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | | | |     G
    G       C T T G       G C A G G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     TGAT
                    G + T
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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