The detailed information of tRNA gene sequence


Sequence ID>SRA1002233
Genome IDSRR001308.320409
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 170
End posion on genome 95
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gtgcgttgga
tRNA gene sequence 
GAGTCGGTAGCTCAGTCGGTAGAGCATCGCCCTTTTAAGGCGAGGGTCCTGGGTTCGAAT
CCCAGCCGACTCACCA
Downstream region at tRNA end position 
caataaatca
Secondary structure (Cloverleaf model)
>SRA1002233	Lys	TTT
                   a      ACCA caataaatca
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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