The detailed information of tRNA gene sequence


Sequence ID>SRA1002234
Genome IDSRR001308.320564
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
aggatttgaa
tRNA gene sequence
GGATCGGTAGTTCAGTTGGTTAGAATGCTGCCCTGTCACGGCAGAGGTCGCGGGTTCGAG
TCCCGTCCGGTCCGCAA
Downstream region at tRNA end position
aagcttcggt
Secondary structure (Cloverleaf model)
>SRA1002234	Asp	GTC
                   a      GCAA aagcttcggt
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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