The detailed information of tRNA gene sequence


Sequence ID>SRA1002240
Genome IDSRR001308.324662
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 145
End posion on genome 69
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccgtgctgg
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGTTAGGACACCACCCTTTCACGGTGAGAACCGGGGTTCGAA
TCCCCGTGGGGACGCCA
Downstream region at tRNA end position 
tctttcaagg
Secondary structure (Cloverleaf model)
>SRA1002240	Glu	TTC
                   g      GCCA tctttcaagg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     GAAC
                    C   A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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