The detailed information of tRNA gene sequence


Sequence ID>SRA1002242
Genome IDSRR001308.325037
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 140
End posion on genome 215
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacatccttg
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCATCTGCTTTGCAAGCAGAGGGTCATCGGTTCGATC
CCGATAGGCTCCACCA
Downstream region at tRNA end position 
aaaccttcag
Secondary structure (Cloverleaf model)
>SRA1002242	Ala	TGC
                   g      ACCA aaaccttcag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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