The detailed information of tRNA gene sequence


Sequence ID>SRA1002257
Genome IDSRR001308.331369
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 252
End posion on genome 177
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ttaaaattat
tRNA gene sequence 
GCGAAAGTAGCTCAGTTGGTAGAGCATTACCTTGCCAAGGTAAGGGTCGCGGGTTCGAGT
CTCGTCTTTCGCTCCA
Downstream region at tRNA end position 
tttgtttaca
Secondary structure (Cloverleaf model)
>SRA1002257	Gly	GCC
                   t      TCCA tttgtttaca
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | + |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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