The detailed information of tRNA gene sequence


Sequence ID>SRA1002270
Genome IDSRR001308.337504
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 180
End posion on genome 107
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggctggcgtt
tRNA gene sequence 
GCTGCTGTAGCTCAGTCGGTAGAGTGCGTCCTTGGTAAGGACGAGGTCGAGGGTTCGAAT
CCCTCCAGCAGCTCtg
Downstream region at tRNA end position 
cgttgggaat
Secondary structure (Cloverleaf model)
>SRA1002270	Thr	GGT
                   t      TCtg cgttgggaat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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