The detailed information of tRNA gene sequence


Sequence ID>SRA1002272
Genome IDSRR001308.340987
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 134
End posion on genome 209
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aactaaattT
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGTAGAGCGCTCGGTTCGGGACCGAGAGGTCGAAGGTTCAAA
TCCTTTCGCCCCGATtt
Downstream region at tRNA end position 
tcaaaaagaa
Secondary structure (Cloverleaf model)
>SRA1002272	Pro	CGG
                   T      ATtt tcaaaaagaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
      C G A        G      + | | | |     A
    C       C T C G       G A A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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