The detailed information of tRNA gene sequence


Sequence ID>SRA1002274
Genome IDSRR001308.341379
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 99
End posion on genome 172
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gtgggccggt
tRNA gene sequence 
TGGGGGATCGTCTAGCGGTAGGACGTCAGTCTCTGGATCTGACTACCTAGGTTCGATTCC
TAGTCCCCCAGCCA
Downstream region at tRNA end position 
aaaccttgtt
Secondary structure (Cloverleaf model)
>SRA1002274	Gln	CTG
                   t      GCCA aaaccttgtt
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     G A T C C     A
        G A        C      | | | | |     G
      C     T C T G       C T A G G     C
      G     + | | |                 T T
      G     G G A C
        T A        G     CTAC
                    T - A
                    C - G
                    A - T
                    G - C
                    T   T
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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