The detailed information of tRNA gene sequence


Sequence ID>SRA1002275
Genome IDSRR001308.343264
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 116
End posion on genome 189
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
gaccgcaccc
tRNA gene sequence
GGGCGGTTAGCTCAGCGGTAGAGCATCGCCTTCACACGGCGAGGGTCGCAGGTTCGAACC
CTGCACCGCCACCAg
Downstream region at tRNA end position
atcacgagaa
Secondary structure (Cloverleaf model)
>SRA1002275	Val	CAC
                   c      CCAg atcacgagaa
                     G   A
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     C G T C C     A
        G A        A      | | | | |     G
      C     C T C G       G C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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