The detailed information of tRNA gene sequence


Sequence ID>SRA1002283
Genome IDSRR001308.347053
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 254
End posion on genome 169
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acggccatgg
tRNA gene sequence 
GCGGACGTGGCGGAATCGGTAGACGCAGCGGACTTAAAATCCGTTTTCCCAAGGAAGTGC
GGGTTCGAGTCCCGCCGTCCGCACCA
Downstream region at tRNA end position 
attttccgga
Secondary structure (Cloverleaf model)
>SRA1002283	Leu	TAA
                   g      ACCA attttccgga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TTTCCCAAGGAAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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