The detailed information of tRNA gene sequence


Sequence ID>SRA1002287
Genome IDSRR001308.348835
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 186
End posion on genome 261
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cttgcgttta
tRNA gene sequence 
GGGCGCGTAGCTCAACTGGCAGAGCAACTGACTCTTAATCAGTAGGTTGTAGGTTCGATT
CCTACCGCGCTCACCA
Downstream region at tRNA end position 
ctcaaaataa
Secondary structure (Cloverleaf model)
>SRA1002287	Lys	CTT
                   a      ACCA ctcaaaataa
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T T
                    T     C A T C C     A
      C A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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