The detailed information of tRNA gene sequence


Sequence ID>SRA1002288
Genome IDSRR001308.349244
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 127
End posion on genome 198
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
taatagatta
tRNA gene sequence 
TCCTCGGTCGTTCAATGGTTAGGACATCGGACTCTAAATCCGAGAACCAGGGTTCGATTC
CCTGTCGAGGAGttt
Downstream region at tRNA end position 
tttttttata
Secondary structure (Cloverleaf model)
>SRA1002288	Sup	CTA
                   a      Gttt tttttttata
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G + T          T T
                    T     G T C C C     A
      T A A        C      | | | | |     G
    G       C T T G       C A G G G     C
    G       | + | |                 T T
    T       G G A C
      T A          A     GAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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