The detailed information of tRNA gene sequence


Sequence ID>SRA1002291
Genome IDSRR001308.352205
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 101
End posion on genome 29
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gttcgacaaa
tRNA gene sequence 
GCTCGGATAGTCTAGTGGTTATGACGTCTGCTTTACACGCAGAAGGTCGCGAGTTCAACC
CTCGCTCTGAGCAatt
Downstream region at tRNA end position 
tttttttttt
Secondary structure (Cloverleaf model)
>SRA1002291	Val	TAC
                   a      Aatt tttttttttt
                     G - C
                     C - G
                     T - A
                     C - G
                     G + T
                     G - C
                     A - T          C C
                    T     C G C T C     A
      T G A        A      | | | | |     A
    G       T C T G       G C G A G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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